| 5'-C C^A G G-3' |
|
| 3'-G G T^C C-5' |
|
| Catalog # | M9580 |
| NOTE | MvaI-neoschizomer of EcoRII, produces DNA fragments that have a |
| 1-base 5'-extension. Unlike EcoRII, MvaI is not blocked by Dcm methylation. |
| Source | E.coli that carries the cloned mvaIR gene from Micrococcus varians RFL19 |
| Concentration | 10u/ul |
| Unit Definition | One unit is defined as the amount of M9580 required to digest 1ug of lambda DNA in 1 hour at 37°C in 50ul of assay buffer. |
| Supplied in 10mM Tris-HCl, pH 7.5, 400mM KCl, 1mM DTT, 0.1mM EDTA, 0.2mg/ml BSA and 50% glycerol. |
| Supplied With | R1625: Restriction Enzyme Buffer A, 10X: Supplied as a liquid in 33mM Tris-acetate, 10mM magnesium acetate, 66mM potassium acetate, 0.1mg/ml BSA (pH 7.9 at 37°C). |
| R1625-04 | Restriction Enzyme Buffer E, 10X: Supplied as a liquid in 10mM Tris-HCl, pH 8.5, 10mM MgCl2, 100mM KCl and 0.1mg/ml BSA. Incubate at 37°C. |
| Dilute with | 10mM Tris-HCl, pH 7.4, 100mM KCl, 1mM EDTA, 1mM DTT, 0.2mg/ml BSA and 50% glycerol. |
| Storage and Stability | May be stored at 4°C for short-term only. For long-term storage, aliquot and store at -20°C. Stable for at least 12 months |
| Overdigestion Assay | No detectable change in the specific fragmentation pattern is observed after 80-fold overdigestion (5u/ug lambda DNA x 16 hours) with M9580. |
|
| Stability during Prolonged Incubation | A minimum of 0.1 units of MvaI is required for complete digestion of 1ug of lambda DNA in 16 hours at 37°C. |
|
| Ligation/Recutting Assay | After 10-fold overdigestion (0.6u/ug DNA x 17 hours) with M9580, more than 90% of the DNA fragments can be ligated in a reaction mixture containing 20-40u of T4 DNA ligase/1µg of fragments and 10% PEG at a 5'-termini concentration of 0.6uM. More than 90% of these sites can be recut. |
|
| Labeled Oligonucleotide (LO) Assay | |
| No detectable degradation of a single-stranded and double-stranded labeled oligonucleotide was observed after incubation with 10 units of MvaI for 4 hours. |
|
| Thermal Inactivation | Not activated by incubation at 80°C for 20min. |
|
| Compatible Ends | Satl, Bme1390I |
|
| Number of Recognition Sites in DNA | |
| Lambda | 70 |
| PhiX174 | 2 |
| M13mp18/19 | 7 |
| pBR322 | 6 |
| pUC18/19, pUC57, pTZ19R/U | 5 |
|
| Protocol for Digestion | |
| Add | |
| Nuclease free water | 16ul |
| 10X R1625-04 | 2ul |
| DNA (0.5-1ug/ml) | 1ul |
| M9580 | 0.5-2ul |
| Mix gently and spin down for a few seconds. Incubate at 37ºC for 1-16 hours.* |
|
| Protocol for Digestion Directly after Amplification | |
| Add | |
| PCR Reaction Mixture | 10ul (~0.1-0.5ug of DNA) |
| Nuclease free water | 18ul |
| 10X R1625-04 | 2ul |
| M9580 | 1-2ul |
| Mix gently and spin down for a few seconds. |
| Incubate at 37ºC for 1-16 hours.* |
| *Star activity appears at a greater than 5-fold digestion (5ux1hour). |