beta-Agarase has a molecular weight of 32kD and hydrolyzes the 1,4-beta-D-galactosidic linkages in agarose, giving the tetramer as the predominant product. It may be used to investigate the structure of different galactans and as an enzymatic reagent for degrading agarose used as a gel medium in electrophoresis. This allows the isolation of oligonucleotides and DNA fragments from gels prepared with low melting point agarose.
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